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Items: 4

1.

Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer [ChIP-Seq 1]

(Submitter supplied) Basal-like and luminal breast tumors have distinct clinical behavior and molecular profiles, yet the underlying mechanisms are poorly defined. To interrogate processes that determine these distinct phenotypes and their inheritance pattern, we generated somatic cell fusions and performed integrated genetic and epigenetic (DNA methylation and chromatin) profiling. We found that the basal-like trait is generally dominant and it is largely defined by epigenetic repression of luminal transcription factors. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9052
6 Samples
Download data: BED
Series
Accession:
GSE38788
ID:
200038788
2.

Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by array; Genome variation profiling by SNP array; Methylation profiling by genome tiling array
7 related Platforms
106 Samples
Download data: BED, BW, CEL, FPKM_TRACKING, PROBSCOREISLAND, TXT
Series
Accession:
GSE38548
ID:
200038548
3.

Illumina Genome Analyzer (Homo sapiens)

Platform
Accession:
GPL9052
ID:
100009052
4.

MCF7_H3K27me3_ChIPSeq

Organism:
Homo sapiens
Source name:
Breast cancer cells
Platform:
GPL9052
Series:
GSE38548 GSE38788
Download data: BED
Sample
Accession:
GSM949580
ID:
300949580
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db=gds|term=GSM949580[Accession]|query=1|qty=2|blobid=MCID_6670ba59909a3d46ade9bf32|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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