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Items: 6

1.

Comparative sequence analysis of plant small RNAs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Persea americana; Petunia x hybrida; Solanum tuberosum; Setaria italica; Musa acuminata; Marsilea quadrifolia; Vitis vinifera; Cycas rumphii; Nuphar advena; Populus trichocarpa; Nicotiana tabacum; Erythranthe guttata; Hordeum vulgare; Triticum aestivum; Zostera marina; Aristolochia fimbriata; Miscanthus x giganteus; Chlamydomonas reinhardtii; Volvox carteri; Picea abies; Cucurbita maxima; Solanum lycopersicum; Sorghum bicolor; Silene latifolia; Panicum virgatum; Chara corallina; Citrus sinensis; Ginkgo biloba; Carica papaya; Capsicum annuum; Lactuca sativa; Zea mays; Amborella trichopoda; Gossypium arboreum
Type:
Non-coding RNA profiling by high throughput sequencing
34 related Platforms
99 Samples
Download data: TXT
Series
Accession:
GSE28755
ID:
200028755
2.

High-throughput sequencing of small RNAs in Miscanthus x giganteus

(Submitter supplied) Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a demonstrated and important role in plant development, stress responses and pathogen resistance. In this work, we used a deep sequencing approach (Sequencing-By-Synthesis, or SBS) to develop sequence resources of small RNAs from different Miscanthus x giganteus tissues (including leaves, flowers, and rhizomes). more...
Organism:
Miscanthus x giganteus
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL9983
3 Samples
Download data
Series
Accession:
GSE20056
ID:
200020056
3.

Illumina Genome Analyzer II (Miscanthus x giganteus)

Organism:
Miscanthus x giganteus
2 Series
3 Samples
Download data
Platform
Accession:
GPL9983
ID:
100009983
4.

Small RNAs from Miscanthus rhizomes

Organism:
Miscanthus x giganteus
Source name:
Rhizomes
Platform:
GPL9983
Series:
GSE20056 GSE28755
Download data
Sample
Accession:
GSM501372
ID:
300501372
5.

Small RNAs from Miscanthus flowers

Organism:
Miscanthus x giganteus
Source name:
Flowers
Platform:
GPL9983
Series:
GSE20056 GSE28755
Download data
Sample
Accession:
GSM501371
ID:
300501371
6.

Small RNAs from Miscanthus leaves

Organism:
Miscanthus x giganteus
Source name:
Leaves
Platform:
GPL9983
Series:
GSE20056 GSE28755
Download data
Sample
Accession:
GSM501370
ID:
300501370
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Supplemental Content

db=gds|term=txid183674[Organism:noexp]|query=1|qty=35|blobid=MCID_669e138d57bd0c1190ab7c05|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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