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Items: 1 to 20 of 300

1.

Transcriptome/Expression analysis in Mycoplasma pneumoniae

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mycoplasmoides pneumoniae M129
Type:
Expression profiling by array; Expression profiling by genome tiling array; Non-coding RNA profiling by genome tiling array
Platforms:
GPL7822 GPL7821
295 Samples
Download data: GPR
Series
Accession:
GSE14019
ID:
200014019
2.

Mycoplasma pneumoniae expression profiling

(Submitter supplied) Two main articles have used this data. The small bacterium Mycoplasma pneumoniae with its annotated 689 protein-coding genes and 44 RNAs constitutes an ideal system for global and conditional transcription analysis in bacteria. We have combined spotted arrays under more than 120 conditions with several strand-specific, high resolution tiling arrays to obtain an unprecedented level of detail of bacterial gene expression. more...
Organism:
Mycoplasmoides pneumoniae M129
Type:
Expression profiling by array
Platform:
GPL7822
252 Samples
Download data: GPR
Series
Accession:
GSE14015
ID:
200014015
3.

Mycoplasma pneumoniae transcriptome analysis

(Submitter supplied) Two main articles have used this data. The small bacterium Mycoplasma pneumoniae with its annotated 689 protein-coding genes and 44 RNAs constitutes an ideal system for global and conditional transcription analysis in bacteria. We have combined spotted arrays under more than 120 conditions with several strand-specific, high resolution tiling arrays to obtain an unprecedented level of detail of bacterial gene expression. more...
Organism:
Mycoplasmoides pneumoniae M129
Type:
Expression profiling by genome tiling array; Non-coding RNA profiling by genome tiling array
Platform:
GPL7821
43 Samples
Download data
Series
Accession:
GSE14014
ID:
200014014
4.

EMBL Mycoplasma pneumoniae Operon Oligonucleotide Array

(Submitter supplied) A custom DNA array has been designed consisting of 688 70mers representing 688 annotated ORFs. The Mycoplasma pneumoniae array consists of oligos (70 bases, amino linker) spotted in the array four times each. The design and synthesis of the 688 oligos (probes) was performed by Operon and the spotting was done in EMBL Genomic Core Facility.
Organism:
Mycoplasmoides pneumoniae M129
2 Series
252 Samples
Download data
Platform
Accession:
GPL7822
ID:
100007822
5.

Custom Affymetrix Mycoplasma pneumoniae tiling array MPM129b520449F

(Submitter supplied) see manufacturer's website
Organism:
Mycoplasmoides pneumoniae M129
2 Series
43 Samples
Download data
Platform
Accession:
GPL7821
ID:
100007821
6.

GC_1-72h

Organism:
Mycoplasmoides pneumoniae M129
Source name:
M129 cells were collected after 3 days in culture
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352049
ID:
300352049
7.

GC_1-48h

Organism:
Mycoplasmoides pneumoniae M129
Source name:
M129 cells were collected after 2 days in culture
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352048
ID:
300352048
8.

GC_1-24h

Organism:
Mycoplasmoides pneumoniae M129
Source name:
M129 cells were collected after 1 day in culture
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352047
ID:
300352047
9.

TFII-TF15

Organism:
Mycoplasmoides pneumoniae M129
Source name:
pMT85-tuf->dnaA-flag line
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352046
ID:
300352046
10.

TFII-TF13

Organism:
Mycoplasmoides pneumoniae M129
Source name:
pMT85-tuf->relA-flag line
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352045
ID:
300352045
11.

TFII-TF6

Organism:
Mycoplasmoides pneumoniae M129
Source name:
pMT85-tuf->GntR-flag line
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352044
ID:
300352044
12.

TFII-TF5

Organism:
Mycoplasmoides pneumoniae M129
Source name:
pMT85-tuf->hrcA-flag line
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352043
ID:
300352043
13.

SR-2dHS

Organism:
Mycoplasmoides pneumoniae M129
Source name:
20 min heat-shock at 42C after 2 days in cluture (control is SR-0'Shx)
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352042
ID:
300352042
14.

SR-60'NV

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Cells grown for 2 days, 0.5mg/ml DL-norvaline added for the indicated time points (60 min) to generate unloaded tRNAs
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352041
ID:
300352041
15.

SR-30'NV

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Cells grown for 2 days, 0.5mg/ml DL-norvaline added for the indicated time points (30 min) to generate unloaded tRNAs
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352040
ID:
300352040
16.

SR-15'NV

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Cells grown for 2 days, 0.5mg/ml DL-norvaline added for the indicated time points (15 min) to generate unloaded tRNAs
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352039
ID:
300352039
17.

SR-5'NV

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Cells grown for 2 days, 0.5mg/ml DL-norvaline added for the indicated time points (5 min) to generate unloaded tRNAs
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352038
ID:
300352038
18.

SR-SR

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Amino acid starvation: stringent response in minimal medium, cells grown 2 days in rich medium, and changed for 15 min to minimal medium with (CtlSR) and without peptides and amino acids (SR)
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352037
ID:
300352037
19.

SR-ctlSR

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Amino acid starvation: stringent response in minimal medium, cells grown 2 days in rich medium, and changed for 15 min to minimal medium with (CtlSR) and without peptides and amino acids (SR)
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352036
ID:
300352036
20.

SR-30'Shx

Organism:
Mycoplasmoides pneumoniae M129
Source name:
Repeat of Shx (cellls grown for 2 days, then 25mM serine hydroxamate added for 30 min to generated unloaded tRNAs)
Platform:
GPL7822
Series:
GSE14015 GSE14019
Download data: GPR
Sample
Accession:
GSM352035
ID:
300352035
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