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Items: 6

1.

High-throughput sequencing of small RNAs in Cucurbita maxima

(Submitter supplied) Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a demonstrated and important role in plant development, stress responses and pathogen resistance. In this work, we used a deep sequencing approach (Sequencing-By-Synthesis, or SBS) to develop sequence resources of small RNAs from Cucurbita maxima tissues (including leaves, flowers and phloem sap). more...
Organism:
Cucurbita maxima
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL13458
3 Samples
Download data: TXT
Series
Accession:
GSE28960
ID:
200028960
2.

Comparative sequence analysis of plant small RNAs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Chlamydomonas reinhardtii; Volvox carteri; Picea abies; Cucurbita maxima; Solanum lycopersicum; Sorghum bicolor; Silene latifolia; Panicum virgatum; Chara corallina; Citrus sinensis; Ginkgo biloba; Carica papaya; Capsicum annuum; Lactuca sativa; Zea mays; Amborella trichopoda; Gossypium arboreum; Persea americana; Petunia x hybrida; Solanum tuberosum; Setaria italica; Musa acuminata; Marsilea quadrifolia; Vitis vinifera; Cycas rumphii; Nuphar advena; Populus trichocarpa; Nicotiana tabacum; Erythranthe guttata; Hordeum vulgare; Triticum aestivum; Zostera marina; Aristolochia fimbriata; Miscanthus x giganteus
Type:
Non-coding RNA profiling by high throughput sequencing
34 related Platforms
99 Samples
Download data: TXT
Series
Accession:
GSE28755
ID:
200028755
3.

Illumina Genome Analyzer II (Cucurbita maxima)

Organism:
Cucurbita maxima
2 Series
3 Samples
Download data
Platform
Accession:
GPL13458
ID:
100013458
4.

Small RNAs from Cucurbita maxima phloem sap

Organism:
Cucurbita maxima
Source name:
Phloem sap
Platform:
GPL13458
Series:
GSE28755 GSE28960
Download data: TXT
Sample
Accession:
GSM717554
ID:
300717554
5.

Small RNAs from Cucurbita maxima flowers

Organism:
Cucurbita maxima
Source name:
Flowers
Platform:
GPL13458
Series:
GSE28755 GSE28960
Download data: TXT
Sample
Accession:
GSM717553
ID:
300717553
6.

Small RNAs from Cucurbita maxima leaves

Organism:
Cucurbita maxima
Source name:
Leaves
Platform:
GPL13458
Series:
GSE28755 GSE28960
Download data: TXT
Sample
Accession:
GSM717552
ID:
300717552
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Supplemental Content

db=gds|term=txid3661[Organism:exp]|query=1|qty=35|blobid=MCID_666cc1f7909a3d46ad9b93e9|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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