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Items: 2

1.

Expression of lignin-degrading enzymes in soils using targeted microarrays

(Submitter supplied) Microarrays have become established tools for describing microbial systems, however the assessment of expression profiles for environmental microbial communities still presents unique challenges. Notably, the concentration of particular transcripts are likely very dilute relative to the pool of total RNA, and PCR-based amplification strategies are vulnerable to amplification biases and the appropriate primer selection. more...
Organism:
Agaricus bisporus; Lentinula edodes; Fusarium oxysporum; Botrytis cinerea; Neurospora crassa; Pleurotus ostreatus; Heterobasidion annosum; synthetic construct; unidentified; Fusarium proliferatum; Pleurotus eryngii; Schizophyllum commune; Trametes cinnabarina; Gelatoporia subvermispora; Trametes coccinea; Cryphonectria parasitica; Phlebia radiata; Trametes versicolor; Coriolopsis gallica; Dichomitus squalens; Phanerodontia chrysosporium
Type:
Expression profiling by array
Platform:
GPL7797
68 Samples
Download data: TXT
Series
Accession:
GSE13977
ID:
200013977
2.

PNL mixed species lignin-degrading enzymes microarray

(Submitter supplied) Probes were printed at 100 µM (in 100 mM Na2HPO4, 200 mM NaCl, 0.01% SDS print buffer) concentrations on epoxysilane-coated glass slides by a Microgrid II printing system (PerkinElmer Life And Analytical Sciences, Inc., Waltham, MA). Control spots were present as buffer, beacon, biotin, polyA and polyT oligonucleotides. The buffer spots were spots of blank print buffer (defined below) intended to ensure probe spots were well-spaced. more...
Organism:
Cryphonectria parasitica; Neurospora crassa; Phlebia radiata; Pleurotus ostreatus; Pleurotus eryngii; Trametes versicolor; Schizophyllum commune; Agaricus bisporus; Lentinula edodes; Fusarium oxysporum; Trametes cinnabarina; Heterobasidion annosum; synthetic construct; Botrytis cinerea; Gelatoporia subvermispora; Coriolopsis gallica; Dichomitus squalens; Trametes coccinea; Fusarium proliferatum; Phanerodontia chrysosporium
1 Series
68 Samples
Download data
Platform
Accession:
GPL7797
ID:
100007797

Supplemental Content

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