GEO DataSets

(Submitter supplied) Mycotoxins are secondary metabolites which are produced by numerous fungi and pose a continuous challenge to the safety and quality of food commodities in South Africa. These toxins have toxicologically relevant effects on humans and animals that eat contaminated foods. In this study, a diagnostic DNA microarray was developed for the identification of the most common food-borne fungi, as well as the genes leading to toxin production. more...

Organism:

Aspergillus niger; Penicillium; Fusarium sporotrichioides; Fusarium graminearum; Penicillium expansum; Fusarium sp.; Fusarium avenaceum; Penicillium italicum; Aspergillus carbonarius; Fusarium anthophilum; Fusarium equiseti; Claviceps purpurea; Alternaria alternata; Aspergillus multicolor; Fusarium subglutinans; Fusarium cerealis; Penicillium viridicatum; Penicillium corylophilum; Fusarium verticillioides; Talaromyces rugulosus; Fusarium solani; Stenocarpella maydis; Fusarium incarnatum; Aspergillus; Aspergillus clavatus; Fusarium oxysporum; Fusarium acuminatum; Talaromyces islandicus; Aspergillus versicolor; Penicillium fellutanum; Fusarium globosum; Pseudopithomyces chartarum; Aspergillus amstelodami; Aspergillus parasiticus; Fusarium sambucinum; Curvularia lunata; Fusarium; Talaromyces funiculosus; Bipolaris sorokiniana; Fusarium decemcellulare; Drechslera sp.; Aspergillus chevalieri

Type:

Expression profiling by array; Other

Platform:

GPL9730

120 Samples

Download data: GPR, TXT

(Submitter supplied) Forty food-borne fungi Protocol: 1. Oligonucleotide probes ranging in size from 16 - 23 bases were transferred to Genetix X7022 384-well plates for arraying. 2. Each well contained a final concentration of 20 µM oligonucleotide probe in 50% DMSO spotting solution (v/v). 3. Between printing runs the plates were stored at -20°C. 4. Prior to printing the plates were incubated at room temperature for 30 min to aid temperature equilibration. more...

Organism:

Aspergillus; Aspergillus amstelodami; Aspergillus clavatus; Aspergillus niger; Penicillium; Fusarium; Fusarium oxysporum; Fusarium sporotrichioides; Fusarium acuminatum; Fusarium graminearum; Alternaria alternata; Penicillium expansum; Talaromyces islandicus; Fusarium avenaceum; Aspergillus carbonarius; Fusarium subglutinans; Aspergillus versicolor; Fusarium cerealis; Fusarium equiseti; Penicillium fellutanum; Penicillium corylophilum; Fusarium verticillioides

1 Series

120 Samples

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