txid715[orgn] AND "serotype 5b"[All Fields] - GEO DataSets

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Select item 2000244701.

Expression analysis of 6 serotypes of Actinobacillus pleuropneumonia during iron deprivation

(Submitter supplied) Investigation of whole genome changes in six serotypes of Actinobacillus pleuropneumoniae in control cultures compared to bacteria grown in media containg the iron chelator 2,2'-dipyridyl.

Organism:: Actinobacillus pleuropneumoniae serovar 1 str. 4074; Actinobacillus pleuropneumoniae serovar 5; Actinobacillus pleuropneumoniae; Actinobacillus pleuropneumoniae serovar 7; Actinobacillus pleuropneumoniae serovar 2 str. 4226; Actinobacillus pleuropneumoniae serovar 6; Actinobacillus pleuropneumoniae serovar 3

Type:: Expression profiling by array

Platform:: GPL11003
48 Samples

Download data: XYS

Series

Accession:: GSE24470

ID:: 200024470

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000155452.

Gene expression profiling of distinct serotypes of Actinobacillus pleuropneumoniae

(Submitter supplied) To further confirm the genetic diversity and virulence evolution of A. pleuropneumoniae To determine the gene sets with different expression levels (high, normal and low, respectively) Keywords: serotype comparison

Organism:: Actinobacillus pleuropneumoniae

Type:: Expression profiling by array

Platform:: GPL8394
15 Samples

Download data: TXT

Series

Accession:: GSE15545

ID:: 200015545

Analyze with GEO2R

Select item 2000136293.

Genomic hybridization of several Actinobacillus pleuropneumoniae serotypes' reference strains compared to strain JL03

(Submitter supplied) To make clear the genetic diversity and virulence evolution at the genome-wide level of A. pleuropneumoniae Keywords: comparative genomic hybridization

Organism:: Actinobacillus pleuropneumoniae

Type:: Genome variation profiling by genome tiling array

Platform:: GPL7644
14 Samples

Download data: TXT

Series

Accession:: GSE13629

ID:: 200013629

Analyze with GEO2R

Select item 2000159114.

Actinobacillus pleuropneumoniae during a natural infection in pigs

(Submitter supplied) Actinobacillus pleuropneumoniae is the etiological agent of porcine pleuropneumonia, a respiratory disease which causes great economic losses worldwide. Many virulence factors are involved in the pathogenesis, namely capsular polysaccharides, RTX toxins, LPS and many iron acquisition systems. In order to identify genes that are expressed in vivo during a natural infection, we undertook transcript profiling experiments with an A. more...

Organism:: Actinobacillus pleuropneumoniae; Actinobacillus pleuropneumoniae serovar 5b str. L20

Type:: Expression profiling by array; Genome variation profiling by array

Platform:: GPL6658
5 Samples

Download data: MEV

Series

Accession:: GSE15911

ID:: 200015911

Analyze with GEO2R

Select item 2000119215.

Microarray-based comparative genomic profiling of reference strains of Actinobacillus pleuropneumoniae

(Submitter supplied) Microarray-based comparative genomic hybridizations were used to estimate whole genomic diversity of representative Actinobacillus pleuropneumoniae strains. Our goal was to identify conserved genes, especially those predicted to encode outer membrane proteins and lipoproteins because of their potential for the development of more effective vaccines. Keywords: Comparative Genomic Hybridisation

Organism:: Actinobacillus pleuropneumoniae; Actinobacillus pleuropneumoniae serovar 5b str. L20

Type:: Genome variation profiling by array

Platform:: GPL6658
33 Samples

Download data: TXT

Series

Accession:: GSE11921

ID:: 200011921

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000146396.

Comparative genomic profiling of reference strains and selected Canadian field isolates of A. pleuropneumoniae

(Submitter supplied) Actinobacillus pleuropneumoniae, the causative agent of porcine pleuropneumonia, is a highly contagious respiratory pathogen that causes severe losses to the swine industry worldwide. Current commercially-available vaccines are of limited value because they do not induce cross-serovar immunity and do not prevent development of the carrier state. Microarray-based comparative genomic hybridizations (M-CGH) were used to estimate whole genomic diversity of representative Actinobacillus pleuropneumoniae strains. more...

Organism:: Actinobacillus pleuropneumoniae; Actinobacillus pleuropneumoniae serovar 5b str. L20

Type:: Genome variation profiling by array

Platform:: GPL6658
74 Samples

Download data: MEV

Series

Accession:: GSE14639

ID:: 200014639

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000063667.

Complementation

(Submitter supplied) To better understand effects of iron starvation on A. pleuropneumoniae and to identify new potential vaccine targets, we conducted transcript profiling using a DNA microarray containing all 2025 ORFs of the genome of A. pleuropneumoniae serotype 5b strain L20. Upon comparing growth of this pathogen in iron-sufficient versus iron-depleted medium, 210 genes were identified as being differentially expressed. more...