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Gm2003 predicted pseudogene 2003 [ Mus musculus (house mouse) ]

Gene ID: 100038997, updated on 17-Aug-2024

Summary

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Official Symbol
Gm2003provided by MGI
Official Full Name
predicted pseudogene 2003provided by MGI
Primary source
MGI:MGI:3780173
See related
Ensembl:ENSMUSG00000080959 AllianceGenome:MGI:3780173
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.0) See more
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Genomic context

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See Gm2003 in Genome Data Viewer
Location:
X A2; X 17.89 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (25577790..25598961, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (25622490..25643661, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930557B15 gene Neighboring gene predicted gene 1993 Neighboring gene predicted gene, 42168 Neighboring gene STARR-seq mESC enhancer starr_46939 Neighboring gene STARR-seq mESC enhancer starr_46940 Neighboring gene X-linked lymphocyte-regulated protein PM1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
X-linked lymphocyte-regulated protein PM1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    25577790..25598961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249648.1 → XP_011247950.1  X-linked lymphocyte-regulated protein PM1-like

    Related
    ENSMUST00000118537.2
    Conserved Domains (1) summary
    pfam04803
    Location:129 → 208
    Cor1; Cor1/Xlr/Xmr conserved region
Nucleotide Protein Strain
Heading Accession and Version

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