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Tgif2lx2 TGFB-induced factor homeobox 2-like, X-linked 2 [ Mus musculus (house mouse) ]

Gene ID: 100039551, updated on 2-Nov-2024

Summary

Official Symbol
Tgif2lx2provided by MGI
Official Full Name
TGFB-induced factor homeobox 2-like, X-linked 2provided by MGI
Primary source
MGI:MGI:3800824
See related
Ensembl:ENSMUSG00000100194 AllianceGenome:MGI:3800824
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable sequence-specific double-stranded DNA binding activity. Orthologous to several human genes including TGIF2LX (TGFB induced factor homeobox 2 like X-linked). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Tgif2lx2 in Genome Data Viewer
Location:
X E1; X 49.58 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (117336924..117337955)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (118427227..118428258)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_47829 Neighboring gene heat shock protein 90, alpha (cytosolic), class A member 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47830 Neighboring gene STARR-seq mESC enhancer starr_47831 Neighboring gene STARR-seq mESC enhancer starr_47832 Neighboring gene STARR-seq mESC enhancer starr_47833 Neighboring gene STARR-seq mESC enhancer starr_47834 Neighboring gene STARR-seq mESC enhancer starr_47835 Neighboring gene STARR-seq mESC enhancer starr_47836 Neighboring gene STARR-seq mESC enhancer starr_47837 Neighboring gene predicted gene 14910 Neighboring gene TGFB-induced factor homeobox 2-like, X-linked 1 Neighboring gene STARR-seq mESC enhancer starr_47838 Neighboring gene STARR-seq mESC enhancer starr_47839 Neighboring gene STARR-seq mESC enhancer starr_47840 Neighboring gene aldolase A, fructose-bisphosphate pseudogene

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC130458

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables sequence-specific double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
TGFB-induced factor homeobox 2-like, X-linked 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001142750.2NP_001136222.1  TGFB-induced factor homeobox 2-like, X-linked 2

    See identical proteins and their annotated locations for NP_001136222.1

    Status: VALIDATED

    Source sequence(s)
    AC123953
    Consensus CDS
    CCDS53177.1
    UniProtKB/TrEMBL
    Q2NKH6, Q8K5B9
    Related
    ENSMUSP00000072333.7, ENSMUST00000072518.8
    Conserved Domains (1) summary
    pfam05920
    Location:5694
    Homeobox_KN; Homeobox KN domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    117336924..117337955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)