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Rpl13-ps6 ribosomal protein L13, pseudogene 6 [ Mus musculus (house mouse) ]

Gene ID: 100040416, updated on 2-Nov-2024

Summary

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Official Symbol
Rpl13-ps6provided by MGI
Official Full Name
ribosomal protein L13, pseudogene 6provided by MGI
Primary source
MGI:MGI:3642685
See related
Ensembl:ENSMUSG00000059776 AllianceGenome:MGI:3642685
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10071
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in bone development. Predicted to be located in cytosolic ribosome; endoplasmic reticulum; and nucleolus. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL13 (ribosomal protein L13). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rpl13-ps6 in Genome Data Viewer
Location:
3 D; 3 28.88 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (58894544..58895285)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (58987123..58987860)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 22491 Neighboring gene predicted gene, 25572 Neighboring gene mediator complex subunit 12-like Neighboring gene STARR-positive B cell enhancer ABC_E6054 Neighboring gene STARR-seq mESC enhancer starr_07762 Neighboring gene STARR-seq mESC enhancer starr_07763 Neighboring gene G protein-coupled receptor 171 Neighboring gene RIKEN cDNA F630111L10 gene Neighboring gene purinergic receptor P2Y, G-protein coupled, 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in bone development ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
part_of cytosolic large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
  
located_in cytosolic ribosome ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
60S ribosomal protein L13-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    58894544..58895285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163486.1 → XP_036019379.1  60S ribosomal protein L13-like

    UniProtKB/TrEMBL
    Q5RKP3
    Related
    ENSMUST00000079761.8
    Conserved Domains (1) summary
    pfam01294
    Location:8 → 187
    Ribosomal_L13e; Ribosomal protein L13e
Nucleotide Protein Strain
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