Gm3055 predicted gene 3055 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Gm3055provided by MGI
Official Full Name: predicted gene 3055provided by MGI
Primary source: MGI:MGI:3809197
See related: AllianceGenome:MGI:3809197
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary: Orthologous to human ZNF624 (zinc finger protein 624). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Broad expression in CNS E18 (RPKM 3.2), CNS E11.5 (RPKM 3.0) and 17 other tissues See more
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Genomic context

Location:: 10 C1; 10 39.72 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	10	NC_000076.7 (81578711..81607008, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	10	NC_000076.6 (81742877..81771174, complement)

Chromosome 10 - NC_000076.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC100040944

Names: KRAB box and zinc finger, C2H2 type domain containing protein LOC100040944

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001346707.1 → NP_001333636.1 uncharacterized protein LOC100040944 isoform 1

Status: VALIDATED

Source sequence(s)

AC174742

Conserved Domains (3) summary

COG5048
Location:331 → 739

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:139 → 159

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam01352
Location:7 → 47

KRAB; KRAB box
NM_001376985.1 → NP_001363914.1 uncharacterized protein LOC100040944 isoform 2

Status: VALIDATED

Source sequence(s)

AC174742

Conserved Domains (3) summary

COG5048
Location:328 → 736

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:136 → 156

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam01352
Location:4 → 44

KRAB; KRAB box