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Gm20877 predicted gene, 20877 [ Mus musculus (house mouse) ]

Gene ID: 100041550, updated on 17-Aug-2024

Summary

Official Symbol
Gm20877provided by MGI
Official Full Name
predicted gene, 20877provided by MGI
Primary source
MGI:MGI:5434233
See related
Ensembl:ENSMUSG00000095520 AllianceGenome:MGI:5434233
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See Gm20877 in Genome Data Viewer
Location:
Y; Y A1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (17093879..17095887)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (17093879..17095887)

Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene multifunctional methyltransferase subunit TRM112-like protein pseudogene Neighboring gene Y-linked testis-specific protein 1-like Neighboring gene predicted gene, 20781 Neighboring gene RNA binding motif 31, Y-linked

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein LOC100041550

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199332.1NP_001186261.1  uncharacterized protein LOC100041550

    See identical proteins and their annotated locations for NP_001186261.1

    Status: PREDICTED

    Source sequence(s)
    CH466817
    Consensus CDS
    CCDS85864.1
    UniProtKB/TrEMBL
    J3QPZ4
    Related
    ENSMUSP00000097682.5, ENSMUST00000100105.5
    Conserved Domains (1) summary
    pfam02513
    Location:2170
    Spin-Ssty; Spin/Ssty Family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000087.8 Reference GRCm39 C57BL/6J

    Range
    17093879..17095887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)