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Gm10375 predicted gene 10375 [ Mus musculus (house mouse) ]

Gene ID: 100042342, updated on 17-Aug-2024

Summary

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Official Symbol
Gm10375provided by MGI
Official Full Name
predicted gene 10375provided by MGI
Primary source
MGI:MGI:3704433
See related
Ensembl:ENSMUSG00000095528 AllianceGenome:MGI:3704433
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 7.5) See more
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Genomic context

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See Gm10375 in Genome Data Viewer
Location:
14 C1; 14 22.49 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (43840084..43845516, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (43602627..43608059, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 21154 Neighboring gene STARR-seq mESC enhancer starr_36504 Neighboring gene predicted gene 5799 Neighboring gene predicted gene, 17654 Neighboring gene STARR-seq mESC enhancer starr_36505 Neighboring gene STARR-seq mESC enhancer starr_36506 Neighboring gene predicted gene 8165 Neighboring gene Rbmxrt pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC107255

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC100042342

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098269.2 → NP_001091739.1  uncharacterized protein LOC100042342

    See identical proteins and their annotated locations for NP_001091739.1

    Status: VALIDATED

    Source sequence(s)
    BB679674, BC089536
    Consensus CDS
    CCDS49460.1
    UniProtKB/TrEMBL
    L7N292, Q5EBJ2
    Related
    ENSMUSP00000159544.1, ENSMUST00000163970.9
    Conserved Domains (1) summary
    pfam04822
    Location:12 → 87
    Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    43840084..43845516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315730.2 → XP_017171219.2  uncharacterized protein LOC100042342 isoform X1

    UniProtKB/TrEMBL
    L7N292, Q6P8U7
    Conserved Domains (1) summary
    pfam04822
    Location:10 → 88
    Takusan
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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