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Eif3j2 eukaryotic translation initiation factor 3, subunit J2 [ Mus musculus (house mouse) ]

Gene ID: 100042807, updated on 2-Nov-2024

Summary

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Official Symbol
Eif3j2provided by MGI
Official Full Name
eukaryotic translation initiation factor 3, subunit J2provided by MGI
Primary source
MGI:MGI:3704486
See related
Ensembl:ENSMUSG00000043424 AllianceGenome:MGI:3704486
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm9781; Eif3j-2; eIF3j-B; eIF3 p35
Summary
Predicted to enable identical protein binding activity. Predicted to be involved in formation of cytoplasmic translation initiation complex. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 3 complex. Orthologous to human EIF3J (eukaryotic translation initiation factor 3 subunit J). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Eif3j2 in Genome Data Viewer
Location:
18 B3; 18 23.33 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (43608483..43610901, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (43475418..43477836, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase-like 3 Neighboring gene predicted gene, 41714 Neighboring gene predicted gene 3650 Neighboring gene janus kinase and microtubule interacting protein 2 Neighboring gene STARR-seq mESC enhancer starr_44453 Neighboring gene STARR-seq mESC enhancer starr_44454 Neighboring gene serine peptidase inhibitor, Kazal type 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
  2. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC91206

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
  
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in formation of cytoplasmic translation initiation complex IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
part_of eukaryotic 43S preinitiation complex IEA
Inferred from Electronic Annotation
more info
  
part_of eukaryotic 48S preinitiation complex IEA
Inferred from Electronic Annotation
more info
  
part_of eukaryotic translation initiation factor 3 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of eukaryotic translation initiation factor 3 complex ISO
Inferred from Sequence Orthology
more info
  
part_of eukaryotic translation initiation factor 3 complex ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit J-B
Names
eIF-3-alpha
eIF-3-alpha-B
eukaryotic translation initiation factor 3 subunit 1
eukaryotic translation initiation factor 3 subunit 1-B
eukaryotic translation initiation factor 3 subunit J

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256055.1 → NP_001242984.1  eukaryotic translation initiation factor 3 subunit J-B

    See identical proteins and their annotated locations for NP_001242984.1

    Status: VALIDATED

    Source sequence(s)
    AC156546
    Consensus CDS
    CCDS57122.1
    UniProtKB/Swiss-Prot
    Q66JS6, Q8BUW6
    UniProtKB/TrEMBL
    Q2YDW1
    Related
    ENSMUSP00000054421.10, ENSMUST00000057110.11
    Conserved Domains (1) summary
    pfam08597
    Location:17 → 263
    eIF3_subunit; Translation initiation factor eIF3 subunit

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    43608483..43610901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_045706.1: Suppressed sequence

    Description
    NR_045706.1: This RefSeq was permanently suppressed because it is now thought that this gene represents a protein coding gene.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q66JS6.1 GenPept UniProtKB/Swiss-Prot:Q66JS6

Gene LinkOut

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