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Gm4349 predicted gene 4349 [ Mus musculus (house mouse) ]

Gene ID: 100043305, updated on 22-Oct-2024

Summary

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Official Symbol
Gm4349provided by MGI
Official Full Name
predicted gene 4349provided by MGI
Primary source
MGI:MGI:3782533
See related
Ensembl:ENSMUSG00000121472 AllianceGenome:MGI:3782533
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in placenta adult (RPKM 6.5), CNS E11.5 (RPKM 5.6) and 25 other tissues See more
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Genomic context

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See Gm4349 in Genome Data Viewer
Location:
3 F2.1; 3 40.74 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (95334660..95338396)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (95427349..95431085)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein S2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_08383 Neighboring gene 28S ribosomal protein S16, mitochondrial pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E654 Neighboring gene aryl hydrocarbon receptor nuclear translocator Neighboring gene STARR-seq mESC enhancer starr_08385 Neighboring gene cathepsin K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • SET domain, bifurcated 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033637.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092202
    Related
    ENSMUST00000358098.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    95334660..95338396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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