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Gm17767 predicted gene, 17767 [ Mus musculus (house mouse) ]

Gene ID: 100045066, updated on 17-Aug-2024

Summary

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Official Symbol
Gm17767provided by MGI
Official Full Name
predicted gene, 17767provided by MGI
Primary source
MGI:MGI:5009931
See related
Ensembl:ENSMUSG00000099413 AllianceGenome:MGI:5009931
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm17767 in Genome Data Viewer
Location:
1 C1.1; 1 26.58 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (51548664..51635877, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (51509505..51596718, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9330175M20 gene Neighboring gene THO complex 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_00877 Neighboring gene STARR-seq mESC enhancer starr_00878 Neighboring gene STARR-positive B cell enhancer mm9_chr1:51515795-51516095 Neighboring gene STARR-positive B cell enhancer ABC_E7721 Neighboring gene STARR-positive B cell enhancer ABC_E1542 Neighboring gene STARR-seq mESC enhancer starr_00879 Neighboring gene nucleic acid binding protein 1 Neighboring gene STARR-seq mESC enhancer starr_00881 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:51641775-51642017 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:51650842-51651025 Neighboring gene STARR-positive B cell enhancer mm9_chr1:51653904-51654205 Neighboring gene STARR-seq mESC enhancer starr_00883 Neighboring gene predicted gene, 31636 Neighboring gene STARR-seq mESC enhancer starr_00886 Neighboring gene STARR-seq mESC enhancer starr_00887 Neighboring gene STARR-seq mESC enhancer starr_00888 Neighboring gene STARR-seq mESC enhancer starr_00889 Neighboring gene myosin IB Neighboring gene STARR-seq mESC enhancer starr_00891 Neighboring gene predicted gene, 33795

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151621.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC148007, AK043869
    Related
    ENSMUST00000189410.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    51548664..51635877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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