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SNORA11D small nucleolar RNA, H/ACA box 11D [ Homo sapiens (human) ]

Gene ID: 100124541, updated on 10-Oct-2023

Summary

Official Symbol
SNORA11Dprovided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 11Dprovided by HGNC
Primary source
HGNC:HGNC:33622
See related
Ensembl:ENSG00000221475 AllianceGenome:HGNC:33622
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
Xp11.22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (52190622..52190748)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (51462321..51462447)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (51933718..51933844)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377208 Neighboring gene Putative uncharacterized protein FLJ39060 Neighboring gene small nucleolar RNA, H/ACA box 11E Neighboring gene MAGE family member D4B Neighboring gene uncharacterized LOC105377209 Neighboring gene MAGE family member D4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:52004803-52005304 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:52005305-52005804 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:52028188-52028851 Neighboring gene family with sequence similarity 156 member A pseudogene

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • SNORA11D snoRNA

Clone Names

  • FLJ39060

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003711.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC245177
    Related
    ENST00000408548.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    52190622..52190748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    51462321..51462447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)