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LOC100126447 uncharacterized LOC100126447 [ Homo sapiens (human) ]

Gene ID: 100126447, updated on 10-Oct-2023

Summary

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Gene symbol
LOC100126447
Gene description
uncharacterized LOC100126447
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100126447 in Genome Data Viewer
Location:
Xq23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (116810931..116817860, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (115187571..115194500, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (115944899..115951828, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene cancer/testis antigen 83 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115860054-115860886 Neighboring gene uncharacterized LOC105373320 Neighboring gene PRPF4B pseudogene 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:115946212-115946988 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:115950867-115951670 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:115951671-115952473 Neighboring gene RNA, U6 small nuclear 1323, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:116065040-116065548 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:116065549-116066057 Neighboring gene Sharpr-MPRA regulatory region 1920 Neighboring gene SET pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145523.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX284115

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    116810931..116817860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    115187571..115194500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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