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RPS27AP20 RPS27A pseudogene 20 [ Homo sapiens (human) ]

Gene ID: 100128355, updated on 17-Sep-2024

Summary

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Official Symbol
RPS27AP20provided by HGNC
Official Full Name
RPS27A pseudogene 20provided by HGNC
Primary source
HGNC:HGNC:54884
See related
Ensembl:ENSG00000182888 AllianceGenome:HGNC:54884
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RPS27AP20 in Genome Data Viewer
Location:
Xp22.33
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (3717109..3717632)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (3336506..3337029)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (3635150..3635673)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 146, pseudogene Neighboring gene protein kinase cAMP-dependent X-linked catalytic subunit Neighboring gene PRKX antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 13686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29374 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrX:3620023-3620624 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:3629037-3629558 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29376 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20640 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20641 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:3632955-3633602 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:3650386-3651585 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20643 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29377 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20645 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20646 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20647 Neighboring gene uncharacterized LOC124900487 Neighboring gene zinc finger protein 839 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:3747599-3748438 Neighboring gene tRNA-Ile (anticodon GAT) 1-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ribosomal protein S27a pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029142.1 

    Range
    101..624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    3717109..3717632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    3336506..3337029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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