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RPS6P15 ribosomal protein S6 pseudogene 15 [ Homo sapiens (human) ]

Gene ID: 100129732, updated on 17-Sep-2024

Summary

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Official Symbol
RPS6P15provided by HGNC
Official Full Name
ribosomal protein S6 pseudogene 15provided by HGNC
Primary source
HGNC:HGNC:36942
See related
Ensembl:ENSG00000230809 AllianceGenome:HGNC:36942
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS6_7_1097
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Genomic context

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See RPS6P15 in Genome Data Viewer
Location:
10q25.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (111498176..111498941, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (112389194..112389959, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (113257934..113258699, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378484 Neighboring gene uncharacterized LOC105378485 Neighboring gene NANOG hESC enhancer GRCh37_chr10:113265858-113266649 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:113297943-113299142 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4061 Neighboring gene NANOG hESC enhancer GRCh37_chr10:113597616-113598117 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:113758480-113758994 Neighboring gene uncharacterized LOC124902501 Neighboring gene uncharacterized LOC107984268

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011016.1 

    Range
    101..866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    111498176..111498941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    112389194..112389959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials