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SCXA scleraxis homolog A (mouse) [ Homo sapiens (human) ]

Gene ID: 100129885, discontinued on 12-Apr-2014

Summary

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Official Symbol
SCXAprovided by HGNC
Official Full Name
scleraxis homolog A (mouse)provided by HGNC
Primary source
HGNC:HGNC:24312
See related
MIM:609067
Gene type
protein coding
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SCX; bHLHa41
Annotation information
Note: In the NCBI Build GRCh37 reference assembly SCXA and SCXB are duplicate genes in close proximity to each other on chromosome 8. In August, 2010 the Genome Reference Consortium determined that the region contains a duplication error. The clone on which SCXA was based (AC110280.8) will be removed from the reference assembly and only SCXB will be present in the assembly. [01 Aug 2013]
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Genomic context

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See SCXA in Genome Data Viewer
Location:
8q24.3
Exon count:
2
Annotation release Status Assembly Chr Location
105 latest, but not current GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (145490603..145492131)
105 latest, but not current HuRef (GCF_000002125.1) 8 AC_000140.1 (140605530..140606754)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General protein information

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Names
scleraxis homolog A (mouse)
basic helix-loop-helix transcription factor scleraxis
class A basic helix-loop-helix protein 41
class A basic helix-loop-helix protein 48
class II bHLH protein scleraxis

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 105 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh37.p13 Primary Assembly

Genomic

  1. NC_000008.10 Reference GRCh37.p13 Primary Assembly

    Range
    145490603..145492131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001008271.1 → NP_001008272.1  

Alternate HuRef

Genomic

  1. AC_000140.1 Alternate HuRef

    Range
    140605530..140606754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001008271.1 → NP_001008272.1  

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7RTU7.1 GenPept UniProtKB/Swiss-Prot:Q7RTU7

Gene LinkOut

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