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LSM3P4 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100130178, updated on 17-Sep-2024

Summary

Official Symbol
LSM3P4provided by HGNC
Official Full Name
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:44349
See related
AllianceGenome:HGNC:44349
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LSM3P4 in Genome Data Viewer
Location:
4q31.21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (142317214..142317774)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (145634447..145635007)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (143238367..143238927)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21938 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:142628696-142629196 Neighboring gene interleukin 15 Neighboring gene MPRA-validated peak5125 silencer Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:142803658-142804281 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:142804282-142804904 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:142823512-142824114 Neighboring gene inositol polyphosphate-4-phosphatase type II B Neighboring gene ribosomal protein L5 pseudogene 13 Neighboring gene uncharacterized LOC101927613 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21939 Neighboring gene uncharacterized LOC105377457 Neighboring gene USP38 divergent transcript

Genomic regions, transcripts, and products

General gene information

Other Names

  • LSM3 U6 small nuclear RNA and mRNA degradation associated pseudogene 4
  • LSM3 homolog, U6 small nuclear RNA associated pseudogene 4
  • LSM3 pseudogene 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012902.1 

    Range
    101..661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    142317214..142317774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    145634447..145635007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)