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LINC00605 long intergenic non-protein coding RNA 605 [ Homo sapiens (human) ]

Gene ID: 100131366, updated on 22-Oct-2024

Summary

Official Symbol
LINC00605provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 605provided by HGNC
Primary source
HGNC:HGNC:43928
See related
Ensembl:ENSG00000251533 AllianceGenome:HGNC:43928
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.2), small intestine (RPKM 0.4) and 8 other tissues See more
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Genomic context

See LINC00605 in Genome Data Viewer
Location:
14q32.32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (103187221..103189028, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (97423140..97424947, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (103653558..103655365, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370685 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103631281-103631787 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6147 Neighboring gene GCSH pseudogene 2 Neighboring gene uncharacterized LOC124903391 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103692850-103693350 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103693351-103693851 Neighboring gene ribosomal protein L21 pseudogene 13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033938.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC035396, BX161461
    Related
    ENST00000514902.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    103187221..103189028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    97423140..97424947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)