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RPS6P4 ribosomal protein S6 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100131548, updated on 17-Sep-2024

Summary

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Official Symbol
RPS6P4provided by HGNC
Official Full Name
ribosomal protein S6 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:36548
See related
AllianceGenome:HGNC:36548
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS6_2_432
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Genomic context

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See RPS6P4 in Genome Data Viewer
Location:
3q26.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (163102039..163116154)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (165876847..165890958)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (162819827..162833942)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986049 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66028 Neighboring gene NANOG hESC enhancer GRCh37_chr3:161940377-161940910 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:161967975-161968114 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:162012557-162013756 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66071 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66079 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:162128820-162129425 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:162129426-162130030 Neighboring gene TOMM22 pseudogene 6 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:162316147-162316792 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:162440387-162441348 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66130 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66156 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66196 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66244 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66277 Neighboring gene small nucleolar RNA U13 Neighboring gene long intergenic non-protein coding RNA 1192 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66341 Neighboring gene uncharacterized LOC105374188 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66379 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66382

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011139.1 

    Range
    101..14216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    163102039..163116154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    165876847..165890958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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