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FAM236B family with sequence similarity 236 member B [ Homo sapiens (human) ]

Gene ID: 100132304, updated on 8-Mar-2024

Summary

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Official Symbol
FAM236Bprovided by HGNC
Official Full Name
family with sequence similarity 236 member Bprovided by HGNC
Primary source
HGNC:HGNC:52640
See related
Ensembl:ENSG00000268994 AllianceGenome:HGNC:52640
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 50.6) See more
Orthologs
all
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Genomic context

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Location:
Xq13.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (72781865..72782660, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (71215360..71216155, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (72001689..72002484, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene RNA, U1 small nuclear 112, pseudogene Neighboring gene DMRT like family C1B Neighboring gene family with sequence similarity 226 member B Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:72027355-72027855 Neighboring gene family with sequence similarity 236 member D Neighboring gene DMRT like family C1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:72132634-72133134 Neighboring gene family with sequence similarity 236 member C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Homology

General protein information

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Preferred Names
protein FAM236B
Names
family with sequence similarity 235 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348072.1 → NP_001335001.1  protein FAM236B isoform 1

    Status: VALIDATED

    Source sequence(s)
    AA436071, AC240504
    Consensus CDS
    CCDS87760.1
    UniProtKB/Swiss-Prot
    A0A1B0GUQ0, A0A1B0GV22
    Related
    ENSP00000489894.1, ENST00000596535.3

  2. NM_001348073.1 → NP_001335002.1  protein FAM236B isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC240504, HY042459
    UniProtKB/TrEMBL
    A0A1X7SCG6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    72781865..72782660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    71215360..71216155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_120493.1: Suppressed sequence

    Description
    NR_120493.1: This RefSeq was removed because it is now thought that this gene does encode a protein.

  2. NR_120494.1: Suppressed sequence

    Description
    NR_120494.1: This RefSeq was removed because it is now thought that this gene does encode a protein.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A1B0GV22.1 GenPept UniProtKB/Swiss-Prot:A0A1B0GV22

Gene LinkOut

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Molecular Biology Databases
Research Materials