U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100162479 cyclin-dependent kinase 2 [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100162479, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100162479
Gene description
cyclin-dependent kinase 2
See related
APHIDBASE:ACYPI003629; EnsemblRapid:LOC100162479
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100162479 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
6
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (161560133..161564935, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383511.1 (167383..172082, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene protogenin B Neighboring gene hippocampus abundant transcript 1 protein Neighboring gene Myosin light chain alkali Neighboring gene neuroligin-4, Y-linked-like Neighboring gene microtubule-associated protein tau Neighboring gene uncharacterized LOC100162280

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cyclin-dependent kinase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    161560133..161564935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001949751.5 → XP_001949786.2  cyclin-dependent kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8R1W5C0
    Related
    XP_001949786.2, XM_001949751.5
    Conserved Domains (1) summary
    cd07829
    Location:25 → 312
    STKc_CDK_like; Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

  2. XM_008189943.3 → XP_008188165.1  cyclin-dependent kinase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8R2FDX7
    Related
    XP_008188165.1, XM_008189943.3
    Conserved Domains (1) summary
    cd07829
    Location:49 → 336
    STKc_CDK_like; Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials