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NDEL1 nudE neurodevelopment protein 1 like 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173007, updated on 10-Oct-2024

Summary

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Gene symbol
NDEL1
Gene description
nudE neurodevelopment protein 1 like 1
Locus tag
CR201_G0048001
See related
Ensembl:ENSPPYG00000007962
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
NUDEL
Orthologs
human mouse all
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Genomic context

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See NDEL1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (8289620..8344352)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 17 NC_072002.1 (8277763..8335145)

Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene KRAB-A domain containing 2 Neighboring gene ribosomal protein L26 Neighboring gene ring finger protein 222 Neighboring gene uncharacterized LOC134760459 Neighboring gene uncharacterized LOC134760460 Neighboring gene myosin heavy chain 10 Neighboring gene U7 small nuclear RNA Neighboring gene small ribosomal subunit protein eS26-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459L019

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of chromosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic centrosome separation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of kinesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear distribution protein nudE-like 1
Names
nudE nuclear distribution E homolog (A. nidulans)-like 1
nudE nuclear distribution gene E homolog (A. nidulans)-like 1
protein Nudel

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132583.1 → NP_001126055.1  nuclear distribution protein nudE-like 1

    See identical proteins and their annotated locations for NP_001126055.1

    Status: PROVISIONAL

    Source sequence(s)
    CR859662
    UniProtKB/Swiss-Prot
    Q5R555, Q5R8T7
    UniProtKB/TrEMBL
    A0A2J8RW45, A0A8I5U874
    Related
    ENSPPYP00000008952.1, ENSPPYT00000009318.2
    Conserved Domains (2) summary
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region
    cl25732
    Location:24 → 195
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    8289620..8344352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063717872.1 → XP_063573942.1  nuclear distribution protein nudE-like 1 isoform X1

  2. XM_063717873.1 → XP_063573943.1  nuclear distribution protein nudE-like 1 isoform X2

  3. XM_063717876.1 → XP_063573946.1  nuclear distribution protein nudE-like 1 isoform X5

  4. XM_063717874.1 → XP_063573944.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I5UL46

  5. XM_063717875.1 → XP_063573945.1  nuclear distribution protein nudE-like 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8RW15, A0A663DIB5, K7EVG9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R8T7.1 GenPept UniProtKB/Swiss-Prot:Q5R8T7

Gene LinkOut

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