U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRS-CGA1-1 tRNA-Ser (anticodon CGA) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189037, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
TRS-CGA1-1provided by HGNC
Official Full Name
tRNA-Ser (anticodon CGA) 1-1provided by HGNC
Primary source
HGNC:HGNC:34596
See related
AllianceGenome:HGNC:34596
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAS6
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRS-CGA1-1 in Genome Data Viewer
Location:
17p13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (8138881..8138962, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (8044270..8044351, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (8042199..8042280, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8155 Neighboring gene tRNA-Arg (anticodon TCT) 2-1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8027282-8027802 Neighboring gene hes family bHLH transcription factor 7 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8157 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8029079-8029880 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8159 Neighboring gene tRNA-Gly (anticodon GCC) 2-6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11665 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:8036923-8037422 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8160 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8161 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8162 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:8043207-8043885 Neighboring gene tRNA-Thr (anticodon AGT) 5-1 Neighboring gene period circadian regulator 1 Neighboring gene microRNA 6883

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Markers

Other Names

  • tRNA-Ser-CGA-1-1
  • transfer RNA serine 6 (anticodon CGA)
  • transfer RNA-Ser (CGA) 1-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    8138881..8138962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    8044270..8044351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases