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TRY-GTA6-1 tRNA-Tyr (anticodon GTA) 6-1 [ Homo sapiens (human) ]

Gene ID: 100189219, updated on 10-Oct-2023

Summary

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Official Symbol
TRY-GTA6-1provided by HGNC
Official Full Name
tRNA-Tyr (anticodon GTA) 6-1provided by HGNC
Primary source
HGNC:HGNC:34782
See related
AllianceGenome:HGNC:34782
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAY8
Expression
Low expression observed in reference dataset See more
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Genomic context

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See TRY-GTA6-1 in Genome Data Viewer
Location:
6p22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (26594874..26594962)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (26463309..26463397)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (26595102..26595190)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Tyr (anticodon GTA) 8-1 Neighboring gene tRNA-Tyr (anticodon GTA) 3-1 Neighboring gene CRISPRi-validated cis-regulatory element chr6.1185 Neighboring gene Sharpr-MPRA regulatory region 4089 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24249 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24250 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24251 Neighboring gene activator of basal transcription 1 Neighboring gene uncharacterized LOC105374989

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Tyr-GTA-6-1
  • transfer RNA tyrosine 8 (anticodon GUA)
  • transfer RNA-Tyr (GTA) 6-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    26594874..26594962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791780.1 Reference GRCh38.p14 PATCHES

    Range
    141071..141159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    26463309..26463397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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