U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRS-GCT4-1 tRNA-Ser (anticodon GCT) 4-1 [ Homo sapiens (human) ]

Gene ID: 100189225, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
TRS-GCT4-1provided by HGNC
Official Full Name
tRNA-Ser (anticodon GCT) 4-1provided by HGNC
Primary source
HGNC:HGNC:34788
See related
AllianceGenome:HGNC:34788
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAS17; TRS-GCT4-3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRS-GCT4-1 in Genome Data Viewer
Location:
6p22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (28597340..28597421, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (28468715..28468796, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (28565117..28565198, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986586 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:28511751-28512333 Neighboring gene tRNA-Arg (anticodon TCG) 5-1 Neighboring gene SCAN domain containing 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:28554695-28555571 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr6:28557063-28557742 Neighboring gene ZBED9 antisense RNA 1 Neighboring gene tRNA-Gln (anticodon TTG) 2-1 Neighboring gene tRNA-Ala (anticodon AGC) 3-1 Neighboring gene tRNA-Ala (anticodon TGC) 9-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • tRNA-Ser-GCT-4-1
  • tRNA-Ser-GCT-4-3
  • transfer RNA serine 17 (anticodon GCU)
  • transfer RNA-Ser (GCT) 4-1
  • transfer RNA-Ser (GCT) 4-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    28597340..28597421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    87211..87292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    28468715..28468796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases