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TRR-TCG1-1 tRNA-Arg (anticodon TCG) 1-1 [ Homo sapiens (human) ]

Gene ID: 100189264, updated on 10-Oct-2023

Summary

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Official Symbol
TRR-TCG1-1provided by HGNC
Official Full Name
tRNA-Arg (anticodon TCG) 1-1provided by HGNC
Primary source
HGNC:HGNC:34827
See related
AllianceGenome:HGNC:34827
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAR22
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Genomic context

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Location:
15q26.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (89335073..89335145)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (87089896..87089968)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (89878304..89878376)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene FA complementation group I Neighboring gene uncharacterized LOC124903548 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:89848389-89848616 Neighboring gene POLG alternative reading frame Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10046 Neighboring gene DNA polymerase gamma, catalytic subunit Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89877323-89877824 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10048 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10047 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10049 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:89880071-89880240 Neighboring gene microRNA 6766 Neighboring gene POLG divergent transcript Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr15:89891730-89892929 Neighboring gene uncharacterized LOC124903549 Neighboring gene Sharpr-MPRA regulatory region 10069 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6794 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6795 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89910855-89911468 Neighboring gene MIR9-3 host gene Neighboring gene microRNA 9-3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • tRNA-Arg-TCG-1-1
  • transfer RNA arginine 22 (anticodon UCG)
  • transfer RNA-Arg (TCG) 1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    89335073..89335145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    87089896..87089968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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