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TRE-CTC1-7 tRNA-Glu (anticodon CTC) 1-7 [ Homo sapiens (human) ]

Gene ID: 100189269, updated on 17-Sep-2024

Summary

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Official Symbol
TRE-CTC1-7provided by HGNC
Official Full Name
tRNA-Glu (anticodon CTC) 1-7provided by HGNC
Primary source
HGNC:HGNC:34832
See related
AllianceGenome:HGNC:34832
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE19
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Genomic context

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See TRE-CTC1-7 in Genome Data Viewer
Location:
6q22.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (125780247..125780318, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (126968922..126968993, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (126101393..126101464, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene HEY2 antisense RNA 1 Neighboring gene long intergenic non-protein coding RNA 2523 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:126023017-126023671 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:126028243-126028789 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:126028790-126029335 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25027 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25028 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25029 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:126066495-126067162 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17518 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17519 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:126091955-126092877 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17520 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:126101539-126102088 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:126102089-126102637 Neighboring gene hes related family bHLH transcription factor with YRPW motif 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17521 Neighboring gene H3K27ac hESC enhancers GRCh37_chr6:126111392-126111892 and GRCh37_chr6:126111893-126112393 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25031 Neighboring gene NCOA7 antisense RNA 1 Neighboring gene nuclear receptor coactivator 7 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:126139229-126139730 Neighboring gene Sharpr-MPRA regulatory region 14390 Neighboring gene RN7SK pseudogene 56

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Glu (CTC) 1-7
  • transfer RNA glutamic acid 19 (anticodon CUC)
  • transfer RNA-Glu (CTC) 1-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    125780247..125780318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    126968922..126968993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
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