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RPS24P17 ribosomal protein S24 pseudogene 17 [ Homo sapiens (human) ]

Gene ID: 100216341, updated on 17-Sep-2024

Summary

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Official Symbol
RPS24P17provided by HGNC
Official Full Name
ribosomal protein S24 pseudogene 17provided by HGNC
Primary source
HGNC:HGNC:36348
See related
Ensembl:ENSG00000243988 AllianceGenome:HGNC:36348
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS24_7_1485
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Genomic context

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See RPS24P17 in Genome Data Viewer
Location:
16q13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (56906498..56907023)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (62702816..62703341)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (56940410..56940935)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10853 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10854 Neighboring gene microRNA 138-2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:56901109-56901693 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56901694-56902278 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10855 Neighboring gene solute carrier family 12 member 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10856 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56908501-56909437 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:56910353-56910852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:56926577-56927308 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10857 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:56937172-56937352 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56937981-56938489 Neighboring gene microRNA 6863 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr16:56946332-56947531 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56965546-56966100 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56966101-56966655 Neighboring gene Sharpr-MPRA regulatory region 13851 Neighboring gene homocysteine inducible ER protein with ubiquitin like domain 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10862 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7516 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7517 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7518 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10863 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10864 Neighboring gene uncharacterized LOC124903811

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009042.1 

    Range
    101..626
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    56906498..56907023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    62702816..62703341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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