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RPL6P6 ribosomal protein L6 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 100270845, updated on 17-Sep-2024

Summary

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Official Symbol
RPL6P6provided by HGNC
Official Full Name
ribosomal protein L6 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:36673
See related
Ensembl:ENSG00000231063 AllianceGenome:HGNC:36673
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL6_5_321
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Genomic context

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See RPL6P6 in Genome Data Viewer
Location:
2q34
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (210088226..210089064)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (210568921..210569759)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (210952950..210953788)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17053 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17054 Neighboring gene ribulose-5-phosphate-3-epimerase Neighboring gene KANSL1L antisense RNA 1 Neighboring gene KAT8 regulatory NSL complex subunit 1 like Neighboring gene NANOG hESC enhancer GRCh37_chr2:210911567-210912293 Neighboring gene uncharacterized LOC107985977 Neighboring gene H3K27ac hESC enhancers GRCh37_chr2:211035158-211035792 and GRCh37_chr2:211035793-211036428 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:211036429-211037062 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:211042111-211042612 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:211042613-211043112 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:211045686-211046331 Neighboring gene acyl-CoA dehydrogenase long chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011311.1 

    Range
    101..939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    210088226..210089064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    210568921..210569759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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