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LINC03010 long intergenic non-protein coding RNA 3010 [ Homo sapiens (human) ]

Gene ID: 100286906, updated on 10-Oct-2023

Summary

Official Symbol
LINC03010provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 3010provided by HGNC
Primary source
HGNC:HGNC:56135
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
7q36.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (155382076..155401782)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (156562719..156582433)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (155174771..155194477)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375592 Neighboring gene insulin induced gene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18845 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155141824-155142690 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155142691-155143555 Neighboring gene uncharacterized LOC105375593 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155164583-155165094 Neighboring gene B cell acute lymphoblastic leukemia expressed Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18846 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155166119-155166630 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155170781-155171281 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155174017-155174828 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155174829-155175640 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155201209-155201931 Neighboring gene uncharacterized LOC105375594 Neighboring gene EN2 divergent transcript Neighboring gene ReSE screen-validated silencer GRCh37_chr7:155233227-155233442 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155246511-155247036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:155247037-155247562 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:155249486-155250477

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147174.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008060

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    155382076..155401782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    156562719..156582433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)