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MIR1302-6 microRNA 1302-6 [ Homo sapiens (human) ]

Gene ID: 100302140, updated on 10-Oct-2023

Summary

Official Symbol
MIR1302-6provided by HGNC
Official Full Name
microRNA 1302-6provided by HGNC
Primary source
HGNC:HGNC:35298
See related
Ensembl:ENSG00000221393 miRBase:MI0006367; AllianceGenome:HGNC:35298
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIRN1302-6; hsa-mir-1302-6
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR1302-6 in Genome Data Viewer
Location:
7p21.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (18127220..18127309, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (18256755..18256844, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (18166843..18166932, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr7:18017138-18017327 Neighboring gene MRM3 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:18126389-18126937 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:18126938-18127485 Neighboring gene phosphoribosyl pyrophosphate synthetase 1 like 1 Neighboring gene MPRA-validated peak6414 silencer Neighboring gene MPRA-validated peak6415 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25677 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25678 Neighboring gene GATA motif-containing MPRA enhancer 275 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25679 Neighboring gene histone deacetylase 9 Neighboring gene uncharacterized LOC124900248 Neighboring gene Sharpr-MPRA regulatory region 1729 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:18436382-18437097 Neighboring gene NANOG hESC enhancer GRCh37_chr7:18447067-18447568 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:18459909-18461108 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25680 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:18548259-18549458 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17987 Neighboring gene NANOG hESC enhancer GRCh37_chr7:18590148-18590649 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:18613316-18613854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:18613855-18614393 Neighboring gene casein kinase 1 alpha 1 pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_031635.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC005249
    Related
    ENST00000408466.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    18127220..18127309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    18256755..18256844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)