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MIR1299 microRNA 1299 [ Homo sapiens (human) ]

Gene ID: 100302167, updated on 17-Sep-2024

Summary

Official Symbol
MIR1299provided by HGNC
Official Full Name
microRNA 1299provided by HGNC
Primary source
HGNC:HGNC:35290
See related
Ensembl:ENSG00000275377 miRBase:MI0006359; AllianceGenome:HGNC:35290
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIRN1299; hsa-mir-1299
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR1299 in Genome Data Viewer
Location:
9p11.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (40929010..40929092, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (42365888..42365970)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (69002239..69002321, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 49 pseudogene Neighboring gene ankyrin repeat domain 30B pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28422 Neighboring gene RNA, U6 small nuclear 156, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr9:66768055-66768556 Neighboring gene NANOG hESC enhancer GRCh37_chr9:66784324-66784825 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66809156-66809719 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66818900-66819484 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:66823139-66823953 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66832750-66833586 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66833587-66834422 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66834423-66835258 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66843600-66844341 Neighboring gene NANOG hESC enhancer GRCh37_chr9:66854522-66855023 Neighboring gene MPRA-validated peak7256 silencer Neighboring gene uncharacterized LOC107986997 Neighboring gene NANOG hESC enhancer GRCh37_chr9:68695497-68695998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:69048303-69048804 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:68712489-68713157 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:68725219-68725948 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19919 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28424 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28425 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28426 Neighboring gene FSHD region gene 1 family member H, pseudogene Neighboring gene phosphoglucomutase 5 pseudogene 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_031629.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL353763
    Related
    ENST00000622265.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    40929010..40929092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    42365888..42365970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)