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LSM3P2 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 100303745, updated on 17-Sep-2024

Summary

Official Symbol
LSM3P2provided by HGNC
Official Full Name
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:44347
See related
AllianceGenome:HGNC:44347
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LSM3P2 in Genome Data Viewer
Location:
12q22
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (94590779..94591445)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (94571559..94572224)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (94984555..94985221)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6787 Neighboring gene microRNA 5700 Neighboring gene transmembrane and coiled-coil domain family 3 Neighboring gene microRNA 7844 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:95007851-95008440 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:95010515-95011014 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6788 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6789 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6790 Neighboring gene uncharacterized LOC105369914 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4728 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:95043785-95044500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6791 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6792 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6793 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6794 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6795 Neighboring gene uncharacterized LOC124902989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6796

Genomic regions, transcripts, and products

General gene information

Other Names

  • LSM3 U6 small nuclear RNA and mRNA degradation associated pseudogene 2
  • LSM3 homolog, U6 small nuclear RNA associated pseudogene 2
  • LSM3 pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012901.3 

    Range
    101..767
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    94590779..94591445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    94571559..94572224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)