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Il4i1b interleukin 4 induced 1B [ Mus musculus (house mouse) ]

Gene ID: 100328588, updated on 2-Nov-2024

Summary

Official Symbol
Il4i1bprovided by MGI
Official Full Name
interleukin 4 induced 1Bprovided by MGI
Primary source
MGI:MGI:5439399
See related
Ensembl:ENSMUSG00000074141 AllianceGenome:MGI:5439399
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
LAO; Fig1; LAAO; Il4i1; mFIG1; Gm21948; Nup62-il4i1
Summary
This locus represents naturally-occurring readthrough transcription between Nup62 (nucleoporin 62) and Il4i1 (interleukin 4 induced 1). It encodes a protein sharing similarity with the protein encoded by Il4i1, but with a longer and distinct N-terminus. [provided by RefSeq, Aug 2015]
Expression
Biased expression in spleen adult (RPKM 63.6), testis adult (RPKM 40.1) and 14 other tissues See more
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Genomic context

See Il4i1b in Genome Data Viewer
Location:
7 B3; 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44465794..44490228)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (44816370..44840804)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vaccinia related kinase 3 Neighboring gene STARR-seq mESC enhancer starr_18814 Neighboring gene STARR-seq mESC enhancer starr_18815 Neighboring gene predicted gene, 29791 Neighboring gene STARR-seq mESC enhancer starr_18816 Neighboring gene STARR-positive B cell enhancer ABC_E1086 Neighboring gene activating transcription factor 5 Neighboring gene nucleoporin 62 Neighboring gene STARR-positive B cell enhancer ABC_E9111 Neighboring gene interleukin 4 induced 1 Neighboring gene TBC1 domain family, member 17 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52112565-52112765 Neighboring gene AKT1 substrate 1 Neighboring gene microRNA 707 Neighboring gene polynucleotide kinase 3'- phosphatase Neighboring gene prostate tumor over expressed gene 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Markers

Readthrough Il4i1b

Included genes: Il4i1, Nup62

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables L-amino-acid oxidase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in acrosomal vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
located_in immunological synapse ISO
Inferred from Sequence Orthology
more info
 
located_in sperm midpiece ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
L-amino-acid oxidase
Names
IL4-induced protein 1
Interleukin-4-induced protein 1
Protein Fig-1
NP_001164495.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171024.1NP_001164495.1  L-amino-acid oxidase precursor

    Status: VALIDATED

    Source sequence(s)
    AK133082, BG276482, BY087056
    UniProtKB/Swiss-Prot
    O09046, Q1LZI6, Q3T9N9, Q3U7S6, Q3V0K2, Q6Y632, Q6YBV6, Q6YDI8, Q8R2G8, Q9CXK7
    UniProtKB/TrEMBL
    D3Z4E0
    Related
    ENSMUSP00000113726.2, ENSMUST00000118125.9
    Conserved Domains (1) summary
    pfam01593
    Location:83511
    Amino_oxidase; Flavin containing amine oxidoreductase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    44465794..44490228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)