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LOC100329083 fibroblast growth factor 8/17/18 [ Saccoglossus kowalevskii ]

Gene ID: 100329083, updated on 19-Oct-2023

Summary

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Gene symbol
LOC100329083
Gene description
fibroblast growth factor 8/17/18
See related
EnsemblRapid:LOC100329083
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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See LOC100329083 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003134840.1 (157899..174823, complement)

NW_003134840.1Genomic Context describing neighboring genes Neighboring gene nucleotide exchange factor SIL1-like Neighboring gene nucleoplasmin-like protein ANO39-like Neighboring gene meiotic recombination protein REC8 homolog Neighboring gene monocarboxylate transporter 12-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003134840 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type 1 fibroblast growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type 2 fibroblast growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibroblast growth factor 8/17/18
Names
fibroblast growth factor 8-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171226.1 → NP_001164697.1  fibroblast growth factor 8/17/18 precursor

    See identical proteins and their annotated locations for NP_001164697.1

    Status: PROVISIONAL

    Source sequence(s)
    GU211195
    UniProtKB/TrEMBL
    D2XMS5
    Related
    NP_001164697.1, NM_001171226.1
    Conserved Domains (1) summary
    pfam00167
    Location:55 → 180
    FGF; Fibroblast growth factor

RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003134840.1 Reference Skow_1.1 Primary Assembly

    Range
    157899..174823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials