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Tstd1 thiosulfate sulfurtransferase like domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100359478, updated on 2-Nov-2024

Summary

Official Symbol
Tstd1provided by RGD
Official Full Name
thiosulfate sulfurtransferase like domain containing 1provided by RGD
Primary source
RGD:2323815
See related
EnsemblRapid:ENSRNOG00000076904 AllianceGenome:RGD:2323815
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in cytoplasmic ribonucleoprotein granule and cytosol. Predicted to be active in cytoplasm. Orthologous to human TSTD1 (thiosulfate sulfurtransferase like domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 422.5), Liver (RPKM 176.8) and 5 other tissues See more
Orthologs
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Genomic context

See Tstd1 in Genome Data Viewer
Location:
13q24
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (86385679..86387315)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (83853421..83854875)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (89805652..89807355)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 30 Neighboring gene upstream transcription factor 1 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene F11 receptor

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 1; thiosulfate:glutathione sulfurtransferase
Names
rCG20339-like
thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
XP_002728074.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    86385679..86387315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728028.6XP_002728074.1  thiosulfate:glutathione sulfurtransferase

    See identical proteins and their annotated locations for XP_002728074.1

    UniProtKB/TrEMBL
    A6JFZ6, A6JFZ7
    Related
    ENSRNOP00000112047.1, ENSRNOT00000150345.1
    Conserved Domains (1) summary
    cl00125
    Location:25130
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...