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Snu13-ps5 small nuclear ribonucleoprotein 13, pseudogene 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100359574, updated on 10-Jul-2024

Summary

Official Symbol
Snu13-ps5provided by RGD
Official Full Name
small nuclear ribonucleoprotein 13, pseudogene 5provided by RGD
Primary source
RGD:2323620
See related
EnsemblRapid:ENSRNOG00000025154 AllianceGenome:RGD:2323620
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable U4atac snRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of U2-type precatalytic spliceosome; U4/U6 x U5 tri-snRNP complex; and U4atac snRNP. Orthologous to human SNU13 (small nuclear ribonucleoprotein 13). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Snu13-ps5 in Genome Data Viewer
Location:
1q55
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (269702073..269702945)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (259716056..259716928)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (281863115..281864546)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene transfer RNA proline (anticodon AGG) 88 Neighboring gene prolactin releasing hormone receptor Neighboring gene CDK2-associated, cullin domain 1 Neighboring gene uncharacterized LOC108349715 Neighboring gene uncharacterized LOC134485267

Genomic regions, transcripts, and products

Pathways from PubChem

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_081607.1 

    Range
    101..973
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    269702073..269702945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)