U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Smim10l1 small integral membrane protein 10 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100360120, updated on 28-Oct-2024

Summary

Go to the top of the page Help
Symbol
Smim10l1provided by RGD
Full Name
small integral membrane protein 10 like 1provided by RGD
Primary source
RGD:2322729
See related
AllianceGenome:RGD:2322729
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Smim10l1b
Summary
Predicted to be located in mitochondrion. Orthologous to human SMIM10L1 (small integral membrane protein 10 like 1). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Smim10l1 in Genome Data Viewer
Location:
4q42
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (168073100..168076291)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (166341699..166345530)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (167218998..167222864)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene taste receptor, type 2, member 103 Neighboring gene large ribosomal subunit protein uL1-like Neighboring gene taste receptor, type 2, member 140 Neighboring gene uncharacterized LOC108350777 Neighboring gene SMR2 protein-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context. Morgenstern M, et al. Cell Metab, 2021 Dec 7. PMID 34800366, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1
Names
small integral membrane protein 10-like 1B
small integral membrane protein 10-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    168073100..168076291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017593058.3 → XP_017448547.1  LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1

    Conserved Domains (1) summary
    pfam15118
    Location:4 → 64
    DUF4560; Domain of unknown function (DUF4560)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.