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Angptl8 angiopoietin-like 8 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100361444, updated on 2-Nov-2024

Summary

Official Symbol
Angptl8provided by RGD
Official Full Name
angiopoietin-like 8provided by RGD
Primary source
RGD:2320121
See related
EnsemblRapid:ENSRNOG00000011490 AllianceGenome:RGD:2320121
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in cellular lipid metabolic process; regulation of lipid metabolic process; and triglyceride homeostasis. Predicted to act upstream of or within cell maturation; fat cell differentiation; and regulation of protein metabolic process. Predicted to be active in extracellular region. Orthologous to human ANGPTL8 (angiopoietin like 8). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Liver (RPKM 136.4), Adrenal (RPKM 59.4) and 7 other tissues See more
Orthologs
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Genomic context

See Angptl8 in Genome Data Viewer
Location:
8q13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (28652555..28654581)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (20376462..20378488)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (22855495..22858565)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene SPC24 component of NDC80 kinetochore complex Neighboring gene KN motif and ankyrin repeat domains 2 Neighboring gene dedicator of cytokinesis 6 Neighboring gene uncharacterized LOC120094090 Neighboring gene RAB3D, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Process Evidence Code Pubs
acts_upstream_of_or_within cell maturation ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular lipid metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within fat cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in fat cell differentiation ISO
Inferred from Sequence Orthology
more info
 
NOT involved_in glucose metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of protein processing ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of lipid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of lipid metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of lipid metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of lipoprotein metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of lipoprotein metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in triglyceride homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within triglyceride homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in triglyceride homeostasis ISO
Inferred from Sequence Orthology
more info
 
NOT involved_in type B pancreatic cell proliferation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
angiopoietin-like protein 8
Names
betatrophin
lipasin
rCG31799-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271710.1NP_001258639.1  angiopoietin-like protein 8 precursor

    See identical proteins and their annotated locations for NP_001258639.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000008
    UniProtKB/TrEMBL
    A6JNU9, D3ZMI0
    Related
    ENSRNOP00000015381.6, ENSRNOT00000015381.9

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    28652555..28654581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)