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Rps15al2 ribosomal protein S15A-like 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362139, updated on 2-Nov-2024

Summary

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Official Symbol
Rps15al2provided by RGD
Official Full Name
ribosomal protein S15A-like 2provided by RGD
Primary source
RGD:2318744
See related
EnsemblRapid:ENSRNOG00000032877 AllianceGenome:RGD:2318744
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rps15a-ps2
Summary
Predicted to be involved in translation. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rps15al2 in Genome Data Viewer
Location:
11q23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (93913037..93913499)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (80408656..80409118)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (84094470..84094958)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2B subunit epsilon Neighboring gene uncharacterized LOC134481032 Neighboring gene uncharacterized LOC120095699 Neighboring gene uncharacterized LOC134481031 Neighboring gene 60S ribosomal protein L15 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS8-like
Names
40S ribosomal protein S15a-like
hCG1994130-like
ribosomal protein S15A, pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    93913037..93913499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039088958.1 → XP_038944886.1  small ribosomal subunit protein uS8-like

    UniProtKB/TrEMBL
    D3ZS61, D3ZZC7
    Related
    ENSRNOP00000049286.2, ENSRNOT00000046642.6
    Conserved Domains (1) summary
    PTZ00158
    Location:1 → 130
    PTZ00158; 40S ribosomal protein S15A; Provisional
Nucleotide Protein Strain
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