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Rps18l5 ribosomal protein S18-like 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362298, updated on 2-Nov-2024

Summary

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Official Symbol
Rps18l5provided by RGD
Official Full Name
ribosomal protein S18-like 5provided by RGD
Primary source
RGD:2318487
See related
EnsemblRapid:ENSRNOG00000030107 AllianceGenome:RGD:2318487
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosolic ribosome. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rps18l5 in Genome Data Viewer
Location:
5q33
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (118112598..118113173)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (112997100..112997655)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (117509318..117509872)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479011 Neighboring gene uncharacterized LOC134479010 Neighboring gene TM2 domain containing 1 Neighboring gene PATJ, crumbs cell polarity complex component Neighboring gene uncharacterized LOC134486954

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosolic ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein uS13-like
Names
40S ribosomal protein S18-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    118112598..118113173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039111113.2 → XP_038967041.1  small ribosomal subunit protein uS13-like

    UniProtKB/TrEMBL
    D3ZM33
    Related
    ENSRNOP00000046090.5, ENSRNOT00000048495.6
    Conserved Domains (1) summary
    PTZ00134
    Location:1 → 152
    PTZ00134; 40S ribosomal protein S18; Provisional
Nucleotide Protein Strain
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