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Rps19l4 ribosomal protein S19 like 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362339, updated on 2-Nov-2024

Summary

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Official Symbol
Rps19l4provided by RGD
Official Full Name
ribosomal protein S19 like 4provided by RGD
Primary source
RGD:2318347
See related
EnsemblRapid:ENSRNOG00000084623 AllianceGenome:RGD:2318347
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit assembly. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia and Diamond-Blackfan anemia 1. Orthologous to human RPS19 (ribosomal protein S19). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Rps19l4 in Genome Data Viewer
Location:
17q12.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (56060415..56061028)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (51365005..51365544)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (54057935..54058462)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene tubulin folding cofactor E Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene uncharacterized LOC134482723 Neighboring gene kinesin family member 5B Neighboring gene Rho GTPase activating protein 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
small ribosomal subunit protein eS19-like
Names
40S ribosomal protein S19-like
ribosomal protein S19-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    56060415..56061028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039096374.2 → XP_038952302.1  small ribosomal subunit protein eS19-like

    UniProtKB/TrEMBL
    F1LYF3
    Related
    ENSRNOP00000106984.1, ENSRNOT00000157627.1
    Conserved Domains (1) summary
    pfam01090
    Location:5 → 141
    Ribosomal_S19e; Ribosomal protein S19e
Nucleotide Protein Strain
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