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Ppp2cal1 protein phosphatase 2 catalytic subunit alpha like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362453, updated on 2-Nov-2024

Summary

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Official Symbol
Ppp2cal1provided by RGD
Official Full Name
protein phosphatase 2 catalytic subunit alpha like 1provided by RGD
Primary source
RGD:2318135
See related
EnsemblRapid:ENSRNOG00000001893 AllianceGenome:RGD:2318135
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable myosin phosphatase activity. Predicted to be located in chromosome, centromeric region; nucleus; and spindle pole. Orthologous to human PPP2CA (protein phosphatase 2 catalytic subunit alpha). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Ppp2cal1 in Genome Data Viewer
Location:
11q23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (95782632..95784383)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (82278288..82280159)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (86421047..86422802)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 45 Neighboring gene claudin 5 Neighboring gene uncharacterized LOC134480932 Neighboring gene uncharacterized LOC120095702

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like
Names
serine/threonine-protein phosphatase 2A catalytic subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    95782632..95784383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039088980.2 → XP_038944908.1  serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like

    UniProtKB/TrEMBL
    A0A0G2JYA4, A0A8I5ZZ39
    Related
    ENSRNOP00000070579.1, ENSRNOT00000002599.8
    Conserved Domains (1) summary
    cd07415
    Location:9 → 293
    MPP_PP2A_PP4_PP6; PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain
Nucleotide Protein Strain
Heading Accession and Version

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