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Lrrc75b leucine rich repeat containing 75B [ Rattus norvegicus (Norway rat) ]

Gene ID: 100365744, updated on 2-Nov-2024

Summary

Official Symbol
Lrrc75bprovided by RGD
Official Full Name
leucine rich repeat containing 75Bprovided by RGD
Primary source
RGD:2318441
See related
EnsemblRapid:ENSRNOG00000075066 AllianceGenome:RGD:2318441
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam211b
Summary
Orthologous to human LRRC75B (leucine rich repeat containing 75B). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 85.9), Heart (RPKM 49.3) and 9 other tissues See more
Orthologs
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Genomic context

See Lrrc75b in Genome Data Viewer
Location:
20p12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (13099741..13105942)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (13100302..13106503)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (14050465..14056670)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene gamma-glutamyltransferase 5 Neighboring gene gamma-glutamyltransferase 1 Neighboring gene uncharacterized LOC120098976 Neighboring gene small nuclear ribonucleoprotein D3 polypeptide Neighboring gene guanylyl cyclase domain containing 1 Neighboring gene microRNA 327

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
leucine-rich repeat-containing protein 75B
Names
family with sequence similarity 211, member B
leucine-rich repeat-containing protein FAM211B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101016.2NP_001094486.2  leucine-rich repeat-containing protein 75B

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000020
    UniProtKB/TrEMBL
    A0A8I5Y6W7, A6JKJ7
    Related
    ENSRNOP00000112021.1, ENSRNOT00000150221.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    13099741..13105942
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)