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Zfp658l1 zinc finger protein 658-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100366030, updated on 2-Nov-2024

Summary

Official Symbol
Zfp658l1provided by RGD
Official Full Name
zinc finger protein 658-like 1provided by RGD
Primary source
RGD:2324613
See related
EnsemblRapid:ENSRNOG00000049446 AllianceGenome:RGD:2324613
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable metal ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Orthologous to human ZNF788P (zinc finger family member 788, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Adrenal (RPKM 60.4), Kidney (RPKM 43.4) and 9 other tissues See more
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Genomic context

See Zfp658l1 in Genome Data Viewer
Location:
14p22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (5194182..5242944, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (4889486..4938248, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (6101453..6148925, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, subfamily G (WHITE), member 3 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC120096558 Neighboring gene ATP-binding cassette, subfamily G (WHITE), member 3-like 3 Neighboring gene uncharacterized LOC134481698 Neighboring gene zinc finger protein 950 like 12

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
zinc finger protein 658-like 1
Names
inhibitor of four 1
rCG37858-like
zinc finger protein 14-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177909.1NP_001171380.1  zinc finger protein 658-like 1

    See identical proteins and their annotated locations for NP_001171380.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474022
    UniProtKB/TrEMBL
    A6K5Q9, F1LX67, Q80V39
    Related
    ENSRNOP00000075802.2, ENSRNOT00000092683.3
    Conserved Domains (2) summary
    smart00349
    Location:1354
    KRAB; krueppel associated box
    pfam01352
    Location:1352
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    5194182..5242944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)